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download programs
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SAMT3.1
Please make a directory "samt" under your home directory and
change to it (cd samt). In samt make a directory "src" and unpack the source
code there (cd src; tar zxvf samt_src.tgz). Please read the README.txt and
the INSTALL.txt before you start to compile. The 3d part of SAMT is an add
on (3d.tgz) and should be installed under samt/3d (cd samt; mkdir 3d; cd 3d;
tar zxvf 3d.tgz) SAMT3.1 ------>
samt_src.tgz 3d -------> 3d.tgz
SADATO The SAMT data tool SADATO can
be used as stand alone tool. Together with SAMT it should be installed under
samt/sadato (cd samt; mkdir sadato; cd sadato; tar zxvf sadato_src.tgz
SADATO ------->
sadato_src.tgz |
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SAMT-Fuzzy
Fuzzy development toolbox including Fuzzy
Generator
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The Fuzzy Generator was developed as
additional tool to SAMT-Fuzzy to allow the semiautomatic training of a fuzzy
model using data. Both programs "samt_fuzzy" and "fuzzy_g" are combined to a
fuzzy development toolbox which can be used together with SAMT or stand alone.
It can be compiled under Linux (Debian Squeeze and Ubuntu 10.04 LTS,...).
Please open the "samt_fuzzy.tgz" (tar zxvf samt_fuzzy.tgz), go to to the new
directory "SAMT_FUZZY" and follow the instructions in INSTALL.txt samt_fuzzy.tgz
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SAMT
Including Samt Data Tool (SADATO)
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The final version of SAMT 3.0 is out. It runs
in the virtual box as a virtual machine with zero installation under all common
operationsystems like Linux, Mac-OS and Windows. It only depends on the
virtualbox from SUN: http://www.virtualbox.org/.The new version contains the
Samt Data Tool Box (SADATO) anda new fuzzy generator for fuzzy rule training
supported by statistics. It can be used to find rules, to find gabs in the
knowledge, to find gabs in the data. This can be very helpful for environmental
science. Please help to make the new version better and write anemail if
you have any problems. This has big advantages: 1.) The user
can use SAMT under Linux, Mac and Windows as host system 2.) The update to
a new version of SAMT is simply a import. 3.) The exchange between host and
guest is supported by the VirtualBox From point of view of the developer of
SAMT the software maintenance is concentrated to one Version and not different
(CD-Version, USB-STick-Version, etc.)
This makes it easier to
communicate with the user. Installation
Please load all three files in a new Directory on your machine.
-
{ebb971d6-a7b3-4097-a975-91e655583d19}.vmdk -
samt.mf -
samt.ovf
Install
VirtualBox and import the loaded files. Then you can start new generated SAMT
in VirtualBox. Here is a hint how to share data between the host and SAMT:
When done with you shared folder(s) specification, you may now go ahead and
actually mount these folders from Ubuntu. First you have to create a mount
point, that is, a directory in your Ubuntu which will reflect the shared folder
from Windows:
- # sudo mkdir /media/windows-share Of course you may
choose an alternative path for your mount point. With your mount point created
you can now mount the shared folder, like this:
- # sudo mount -t vboxsf folder-name /media/windows-share
Where folder-name will be the name you assigned for this folder when you were
adding it in the shared folders list.
You could use the /etc/init.d/rc.local script to execute
these commands on startup to have the shared folders automatically mounted
every time you start your Ubuntu VirtualBox.
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Including Samt Data Tool
(SADATO) Download
sadato.tgz SADATO Help
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README is an integrated development
platform for neural networks (NN) and Support Vector Machines (SVM). It also
combines a data base engine (sqlite3) with the statistical library apophenia.
This allows the efficient storage of data sets and the statistical analysis of
the data. All is wrapped by a graphical user interface written in QT and
developed under the operating system Linux. To compile it please install
first:
- gnu scientific library (gsl):
http://www.gnu.org/software/gsl/
- sqlite3: http://www.sqlite.org/
- QT: http://www.qtsoftware.com/products/
- libqwt5: http://qwt.sourceforge.net/
The easiest way to do this is using a modern Ubuntu
and select this software via the packet manager Synaptic The additional
basis software for SADATO must be installed from source:
- libfann: http://leenissen.dk/fann/
- libsvm: http://www.csie.ntu.edu.tw/~cjlin/libsvm/
- apophenia: http://apophenia.sourceforge.net (please use
apophenia-0.23-09_Feb_10.tgz
(674KB)
The apophenia has a bug in "histogram.h" which contains a
parameter called "template" which is a keyword in C++. Please rename it.
The installation is strait forward and should run smoothly. Is all
installed then unpack the sadato.tgz: tar -zxvf sadato.tgz and go in the new
created directory "sadato".
cd sadato In this directory there is a
file sadato.qwt which is used to create a Makefile. Please check the software
and the path name and adapt that if necessary. To compile it type:
This can takes about one minute to finish.
To use
SADATO the environment variable: export SADATO=/home/ralf/sadato should be
included in the .bashrc of your home directory.
SADATO itself
expects that all data set are read in as CSV-Files (exported by Open Office for
example) and stored as data base table before it can be analyzed. This helps to
organize all your data sets. The combination of multiple statistics, neural
networks and support vector machines allows to compare the results. SADATO can
be used to handle regression problems as well as for classification problems.
The development of SADATO is not finished yet. We have some ideas like: 1.)
include a graphical analysis for a selected column. This includes a simple
graph and a continuous wavlet transformation to detect some cycles in the data
set. 2.) add new radial basis function network and counter propagation
network.
It would be nice if we could get some response about SADATO.
Please write a email to: Dr. Ralf Wieland: rwieland@zalf.de or Karin Groth:
kgroth@zalf.de SADATO is published under GPL V3
http://www.gnu.de/documents/gpl.de.html
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SAMT-
Source (about 30 MB) SAMT-Version 2.8.5 <<
part I >>
<<part II
>>
install-procedure The source are packed in a
tgz file samt.tgz please install it with: - tar -zxvf samt_data.tgz and
compile it. The best location for samt is /usr/local/samt for the sources and
binaries and ~/new_samt for the data. Please install the following
libraries before compiling SAMT:
Remark: all libraries and SAMT are tested
on SuSE9.x, SuSE10.x, Ubuntu 8.04 LTS, 8.10, Fedora 9, Scientific Linux 5.1,
5.2 Remark: use the
bashrc as
example for your .bashrc |
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SAMT-USB-Stick make_stick.txt knoppix-data.img knoppix.iso samt.tgz
SAMT- CD (about 700 MB) SAMT-Version
2.8.5 - load the iso image to your computer - burn this image on CD
This image contains a Knoppix system including SAMT
Shutdown your
computer, then boot from this CD - open a shell - start samt by typing:
new_samt
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